Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 60 |
| Temperature range | thermophilic |
| Habitat | Arima Onsen; hot spring; nonvolcanic Arima Onsen (hot spring) |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles - Pairs |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rxycam_00881 | Q7LGC8 | Negative | 849639 - 850649 | 37881.4 |
| hypothetical protein | Rxycam_00882 | Not Available | Positive | 850747 - 851784 | 37287.7 |
| hypothetical protein | Rxycam_00883 | P94576 | Positive | 851874 - 852959 | 39321.6 |
| hypothetical protein | Rxycam_00884 | Q7LFX5 | Negative | 852956 - 853843 | 34048.9 |
| hypothetical protein | Rxycam_00885 | Q9HTC0 | Negative | 853843 - 855069 | 44114.9 |
| d-inositol-3-phosphate glycosyltransferase | Rxycam_00886 | P71243 | Negative | 855066 - 856271 | 43530.4 |
| d-inositol-3-phosphate glycosyltransferase | Rxycam_00887 | Q81ST7 | Negative | 856262 - 857410 | 41152.4 |
| hypothetical protein | Rxycam_00888 | Not Available | Negative | 857407 - 858786 | 48346.2 |
| hypothetical protein | Rxycam_00889 | Q9NS84 | Negative | 858774 - 859739 | 35518.7 |
| hypothetical protein | Rxycam_00890 | Not Available | Negative | 859736 - 861130 | 47580.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
