Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 60 |
| Temperature range | thermophilic |
| Habitat | Arima Onsen; hot spring; nonvolcanic Arima Onsen (hot spring) |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles - Pairs |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| utp--glucose-1-phosphate uridylyltransferase | Rxycam_00701 | L7N6A5 | Negative | 668599 - 669702 | 38903.9 |
| nadh-quinone oxidoreductase subunit n | Rxycam_00702 | Q1AVJ2 | Negative | 669715 - 671154 | 49516.2 |
| nadh-quinone oxidoreductase subunit m | Rxycam_00703 | Q1RKE5 | Negative | 671156 - 672610 | 51185.5 |
| nad(p)h-quinone oxidoreductase subunit 2, chloroplastic | Rxycam_00704 | P31971 | Negative | 672607 - 674577 | 70459.6 |
| nadh-quinone oxidoreductase subunit 11 | Rxycam_00705 | Q1AVI9 | Negative | 674595 - 674933 | 11790.8 |
| hypothetical protein | Rxycam_00706 | Q00243 | Negative | 674933 - 675457 | 18458.0 |
| nadh-quinone oxidoreductase subunit h | Rxycam_00707 | Q1AVI7 | Negative | 675473 - 676480 | 36874.1 |
| nadh-quinone oxidoreductase subunit 4 | Rxycam_00708 | Q1AVI6 | Negative | 676468 - 677658 | 45249.6 |
| nad(p)h-quinone oxidoreductase subunit j, chloroplastic | Rxycam_00709 | P56896 | Negative | 677661 - 678152 | 18592.2 |
| nad(p)h-quinone oxidoreductase subunit k, chloroplastic | Rxycam_00710 | Q1AVI4 | Negative | 678154 - 678894 | 27526.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
