Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 60 |
| Temperature range | thermophilic |
| Habitat | Arima Onsen; hot spring; nonvolcanic Arima Onsen (hot spring) |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles - Pairs |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative aaa domain-containing protein | Rxycam_00061 | P9WQN0 | Positive | 61145 - 62455 | 47453.5 |
| hypothetical protein | Rxycam_00062 | Not Available | Positive | 62698 - 62916 | 7927.83 |
| hypothetical protein | Rxycam_00063 | Not Available | Positive | 62913 - 63851 | 36070.0 |
| l-threonine 3-dehydrogenase | Rxycam_00064 | Q03132 | Positive | 66224 - 67156 | 31409.0 |
| hypothetical protein | Rxycam_00065 | Q5JGC2 | Positive | 67237 - 68421 | 42266.1 |
| trans-2,3-dihydro-3-hydroxyanthranilate isomerase | Rxycam_00066 | Q8NIL3 | Positive | 69449 - 70291 | 30430.3 |
| hypothetical protein | Rxycam_00067 | P24537 | Negative | 70842 - 71105 | 9432.53 |
| hypothetical protein | Rxycam_00068 | Not Available | Positive | 71350 - 71544 | 6739.03 |
| hypothetical protein | Rxycam_00069 | O31443 | Positive | 71606 - 72541 | 36062.1 |
| 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial | Rxycam_00070 | P96597 | Positive | 72579 - 73601 | 38292.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
