Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 60 |
| Temperature range | thermophilic |
| Habitat | Arima Onsen; hot spring; nonvolcanic Arima Onsen (hot spring) |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles - Pairs |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rxycam_00051 | Q9Y933 | Positive | 50091 - 50807 | 26144.8 |
| glutamine synthetase | Rxycam_00052 | I3R176 | Positive | 50804 - 52132 | 47630.7 |
| steroid c26-monooxygenase | Rxycam_00053 | Q0S7M1 | Positive | 52143 - 53387 | 47723.7 |
| hypothetical protein | Rxycam_00054 | P17296 | Positive | 53384 - 54307 | 34893.1 |
| hypothetical protein | Rxycam_00055 | Q7NSA6 | Positive | 54304 - 55104 | 29191.6 |
| (z)-2-((n-methylformamido)methylene)-5- hydroxybutyrolactone dehydrogenase | Rxycam_00056 | P19059 | Positive | 55101 - 56567 | 52723.7 |
| n-formyl-4-amino-5-aminomethyl-2- methylpyrimidine deformylase | Rxycam_00057 | O34984 | Positive | 56564 - 57841 | 45001.4 |
| putrescine importer puup | Rxycam_00058 | P0AA48 | Positive | 57841 - 59373 | 52502.6 |
| tryptophan decarboxylase | Rxycam_00059 | I0DFJ0 | Positive | 59370 - 60818 | 52095.2 |
| hypothetical protein | Rxycam_00060 | Not Available | Positive | 60871 - 61119 | 9625.63 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
