Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 60 |
| Temperature range | thermophilic |
| Habitat | Arima Onsen; hot spring; nonvolcanic Arima Onsen (hot spring) |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles - Pairs |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal silencing factor rsfs | Rxycam_00561 | P54457 | Negative | 529397 - 529792 | 15153.6 |
| putative nicotinate-nucleotide adenylyltransferase | Rxycam_00562 | Q1AVU4 | Negative | 529789 - 530433 | 24022.1 |
| gtpase obg | Rxycam_00563 | Q1AVU3 | Negative | 530443 - 531681 | 44319.6 |
| 50s ribosomal protein l27 | Rxycam_00564 | Q1AVU2 | Negative | 531713 - 531973 | 9031.79 |
| 50s ribosomal protein l21 | Rxycam_00565 | Q1AVU1 | Negative | 531979 - 532266 | 11016.5 |
| putative peptidoglycan glycosyltransferase ftsw | Rxycam_00566 | P07373 | Negative | 532395 - 533534 | 40590.8 |
| hypothetical protein | Rxycam_00567 | Not Available | Negative | 533531 - 534052 | 17819.3 |
| hypothetical protein | Rxycam_00568 | Q8Y6Y4 | Negative | 534082 - 535002 | 32735.9 |
| cell shape-determining protein mreb | Rxycam_00569 | Q01465 | Negative | 535005 - 536045 | 36604.4 |
| hypothetical protein | Rxycam_00570 | Q1AVT6 | Negative | 536078 - 536758 | 24282.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
