Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 60 |
| Temperature range | thermophilic |
| Habitat | Arima Onsen; hot spring; nonvolcanic Arima Onsen (hot spring) |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles - Pairs |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rxycam_00521 | P25254 | Negative | 493605 - 493949 | 12359.6 |
| pyrroline-5-carboxylate reductase | Rxycam_00522 | P74572 | Negative | 493946 - 494737 | 27587.5 |
| cell division protein sepf | Rxycam_00523 | Q1AVY0 | Negative | 494734 - 495291 | 20650.1 |
| pyridoxal phosphate homeostasis protein | Rxycam_00524 | O66631 | Negative | 495281 - 496003 | 27143.5 |
| polyphenol oxidase | Rxycam_00525 | Q9RT03 | Negative | 496000 - 496761 | 27166.8 |
| cell division protein ftsz | Rxycam_00526 | P45500 | Negative | 496781 - 497857 | 37846.3 |
| cell division protein ftsa | Rxycam_00527 | P47203 | Negative | 497916 - 499118 | 42886.7 |
| cell division protein ftsq | Rxycam_00528 | Not Available | Negative | 499133 - 499771 | 23094.9 |
| udp-n-acetylmuramate--l-alanine ligase | Rxycam_00529 | Q1AVX4 | Negative | 499810 - 501153 | 48281.8 |
| udp-n-acetylglucosamine--n-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol n-acetylglucosamine transferase | Rxycam_00530 | Q1AVX3 | Negative | 501150 - 502208 | 37577.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
