Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 60 |
| Temperature range | thermophilic |
| Habitat | Arima Onsen; hot spring; nonvolcanic Arima Onsen (hot spring) |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles - Pairs |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transporter | Rxycam_00041 | P9WPD9 | Negative | 41702 - 42970 | 43792.5 |
| hypothetical protein | Rxycam_00042 | Q58821 | Negative | 43011 - 43490 | 17396.8 |
| putative transporter | Rxycam_00043 | P9WPD9 | Positive | 43606 - 44871 | 45057.1 |
| d-inositol-3-phosphate glycosyltransferase | Rxycam_00044 | P9WMY8 | Negative | 44859 - 46409 | 55440.5 |
| hypothetical protein | Rxycam_00045 | Not Available | Positive | 46561 - 47412 | 32742.8 |
| sec-independent protein translocase protein tata | Rxycam_00046 | Q1AUL2 | Negative | 47409 - 47597 | 7166.82 |
| hypothetical protein | Rxycam_00047 | Not Available | Negative | 47594 - 48034 | 16171.4 |
| hypothetical protein | Rxycam_00048 | Not Available | Negative | 48031 - 48399 | 13930.3 |
| hth-type transcriptional regulator lutr | Rxycam_00049 | P44487 | Negative | 48407 - 49093 | 25609.6 |
| hypothetical protein | Rxycam_00050 | O28058 | Positive | 49216 - 50094 | 31795.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
