Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 60 |
| Temperature range | thermophilic |
| Habitat | Arima Onsen; hot spring; nonvolcanic Arima Onsen (hot spring) |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles - Pairs |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rxycam_00471 | Q6NHD4 | Negative | 446697 - 447152 | 16515.4 |
| hypothetical protein | Rxycam_00472 | Not Available | Negative | 447149 - 447403 | 9377.07 |
| utp--glucose-1-phosphate uridylyltransferase | Rxycam_00473 | P74285 | Negative | 447443 - 449944 | 90702.4 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | Rxycam_00474 | Q8MZC4 | Negative | 449946 - 450449 | 17923.0 |
| gtpase der | Rxycam_00475 | Q9EWW8 | Negative | 450446 - 451747 | 46700.2 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | Rxycam_00476 | Q8DNY1 | Negative | 451744 - 452328 | 21874.3 |
| cytidylate kinase | Rxycam_00477 | Q02CZ9 | Negative | 452350 - 453033 | 24283.3 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | Rxycam_00478 | B2IYE4 | Negative | 453056 - 454396 | 47416.6 |
| ribosomal large subunit pseudouridine synthase b | Rxycam_00479 | O67444 | Negative | 454393 - 455094 | 25704.4 |
| segregation and condensation protein b | Rxycam_00480 | Q2RIR6 | Negative | 455099 - 455659 | 19753.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
