Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 60 |
| Temperature range | thermophilic |
| Habitat | Arima Onsen; hot spring; nonvolcanic Arima Onsen (hot spring) |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles - Pairs |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| regulatory protein recx | Rxycam_00461 | A1T7T4 | Positive | 437105 - 437752 | 24620.0 |
| ribonuclease y | Rxycam_00462 | Q1AW41 | Positive | 437807 - 439351 | 57586.6 |
| hypothetical protein | Rxycam_00463 | Not Available | Positive | 439355 - 440278 | 33554.7 |
| pp_00458 | Rxycam_00464 | Not Available | Positive | 440259 - 441602 | Not Available |
| trna dimethylallyltransferase | Rxycam_00465 | Q1AW38 | Positive | 441608 - 442459 | 31432.3 |
| gtpase hflx | Rxycam_00466 | Q8RAS5 | Positive | 442459 - 443745 | 47343.5 |
| hypothetical protein | Rxycam_00467 | O26337 | Positive | 443726 - 444472 | 26493.2 |
| tyrosine recombinase xerc | Rxycam_00468 | Q7ZAJ8 | Negative | 444515 - 445450 | 35342.9 |
| adenine phosphoribosyltransferase | Rxycam_00469 | Q1AW34 | Negative | 445434 - 445985 | 19829.7 |
| putative hth-type transcriptional regulator | Rxycam_00470 | P9WME6 | Negative | 445982 - 446662 | 25799.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
