Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 60 |
| Temperature range | thermophilic |
| Habitat | Arima Onsen; hot spring; nonvolcanic Arima Onsen (hot spring) |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles - Pairs |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease 3 | Rxycam_00421 | B2A2N1 | Positive | 397544 - 398203 | 24157.9 |
| chromosome partition protein smc | Rxycam_00422 | Q73VM3 | Positive | 398307 - 401588 | 120412.0 |
| signal recognition particle receptor ftsy | Rxycam_00423 | A9CHH2 | Positive | 401670 - 402650 | 34934.8 |
| signal recognition particle protein | Rxycam_00424 | P66845 | Positive | 402654 - 403985 | 48836.5 |
| 30s ribosomal protein s16 | Rxycam_00425 | Q1AW77 | Positive | 404016 - 404273 | 9778.87 |
| hypothetical protein | Rxycam_00426 | Q97I96 | Positive | 404281 - 404520 | 8987.12 |
| ribosome maturation factor rimm | Rxycam_00427 | Q1AW75 | Positive | 404526 - 405017 | 17981.5 |
| trna (guanine-n(1)-)-methyltransferase | Rxycam_00428 | C0QQJ9 | Positive | 405030 - 405704 | 24525.3 |
| 50s ribosomal protein l19 | Rxycam_00429 | Q1AW73 | Positive | 405807 - 406136 | 12485.2 |
| ribonuclease hii | Rxycam_00430 | Q7TXM7 | Positive | 406145 - 406771 | 21311.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
