Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 60 |
| Temperature range | thermophilic |
| Habitat | Arima Onsen; hot spring; nonvolcanic Arima Onsen (hot spring) |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles - Pairs |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rxycam_00031 | Q4UKR8 | Positive | 31869 - 32330 | 17334.6 |
| putative amino-acid metabolite efflux pump | Rxycam_00032 | O32256 | Positive | 32445 - 33338 | 31039.9 |
| hypothetical protein | Rxycam_00033 | Not Available | Negative | 33335 - 33703 | 13780.5 |
| inosine-5'-monophosphate dehydrogenase | Rxycam_00034 | P39066 | Positive | 33793 - 34446 | 23449.5 |
| acetoin utilization protein acuc | Rxycam_00035 | P39067 | Positive | 34443 - 35606 | 42515.5 |
| atp-dependent clp protease adapter protein clps | Rxycam_00036 | Q31QE7 | Positive | 35643 - 35963 | 11984.6 |
| enterobactin exporter ents | Rxycam_00037 | O31561 | Positive | 36047 - 37240 | 40325.8 |
| hypothetical protein | Rxycam_00038 | Q9WY30 | Positive | 37275 - 38627 | 46518.3 |
| hypothetical protein | Rxycam_00039 | O67821 | Positive | 38679 - 40640 | 69627.1 |
| gtp 3',8-cyclase | Rxycam_00040 | A5CYZ0 | Negative | 40650 - 41636 | 36743.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
