Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 60 |
| Temperature range | thermophilic |
| Habitat | Arima Onsen; hot spring; nonvolcanic Arima Onsen (hot spring) |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles - Pairs |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rxycam_00361 | P39897 | Negative | 341268 - 341792 | 18777.4 |
| putative protein yqgn | Rxycam_00362 | A0R3H2 | Positive | 341877 - 342470 | 21890.4 |
| crossover junction endodeoxyribonuclease ruvc | Rxycam_00363 | Q1AWE2 | Positive | 342568 - 343083 | 18385.4 |
| holliday junction atp-dependent dna helicase ruva | Rxycam_00364 | Q1AWE1 | Positive | 343112 - 343708 | 20825.2 |
| holliday junction atp-dependent dna helicase ruvb | Rxycam_00365 | Q1AWE0 | Positive | 343709 - 344776 | 39146.8 |
| hypothetical protein | Rxycam_00366 | Not Available | Positive | 344805 - 345083 | 10271.2 |
| dihydroxy-acid dehydratase | Rxycam_00367 | A7NNA3 | Negative | 345064 - 346773 | 60228.3 |
| catechol-2,3-dioxygenase | Rxycam_00368 | P54721 | Positive | 346887 - 347390 | 19160.5 |
| hypothetical protein | Rxycam_00369 | C0H463 | Positive | 347410 - 347649 | 8705.43 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | Rxycam_00370 | Q1AWD5 | Positive | 347656 - 348660 | 37132.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
