Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 60 |
| Temperature range | thermophilic |
| Habitat | Arima Onsen; hot spring; nonvolcanic Arima Onsen (hot spring) |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles - Pairs |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein insertase yidc | Rxycam_03132 | A8G7P8 | Negative | 3066587 - 3067324 | 28162.1 |
| hypothetical protein | Rxycam_03133 | Not Available | Negative | 3067401 - 3067730 | 11028.7 |
| hypothetical protein | Rxycam_03134 | Q4UKR8 | Positive | 3067939 - 3068388 | 16583.6 |
| hypothetical protein | Rxycam_03135 | O05248 | Positive | 3068492 - 3069163 | 24056.7 |
| is110 family transposase ismno7 | Rxycam_03136 | P20665 | Negative | 3069303 - 3070274 | 35285.9 |
| elongation factor g | Rxycam_03137 | Q8R7V1 | Positive | 3070500 - 3072545 | 74441.5 |
| hypothetical protein | Rxycam_03138 | Not Available | Positive | 3072712 - 3073392 | 24967.8 |
| putative protein yyap | Rxycam_03139 | P37508 | Positive | 3073474 - 3074013 | 19963.0 |
| glucosyl-3-phosphoglycerate synthase | Rxycam_03140 | A9BHI9 | Negative | 3074088 - 3075095 | 37227.4 |
| 5'-nucleotidase sure | Rxycam_03141 | Q1ATN8 | Positive | 3075236 - 3076033 | 28657.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
