Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 60 |
| Temperature range | thermophilic |
| Habitat | Arima Onsen; hot spring; nonvolcanic Arima Onsen (hot spring) |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles - Pairs |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-lactate permease | Rxycam_00301 | O33654 | Negative | 284824 - 286212 | 45303.1 |
| hth-type transcriptional regulator sutr | Rxycam_00302 | P77626 | Positive | 286269 - 286865 | 21669.9 |
| hypothetical protein | Rxycam_00303 | Not Available | Negative | 286832 - 287341 | 18218.5 |
| hypothetical protein | Rxycam_00304 | Q9HJ28 | Negative | 287437 - 288603 | 42383.5 |
| glutathione hydrolase proenzyme | Rxycam_00305 | P74181 | Positive | 288728 - 290266 | 53902.2 |
| arginase | Rxycam_00306 | P53608 | Positive | 290259 - 291176 | 32352.1 |
| trk system potassium uptake protein trkh | Rxycam_00307 | E1V6C5 | Negative | 291173 - 292612 | 50259.2 |
| trk system potassium uptake protein trka | Rxycam_00308 | P0A2K0 | Negative | 292602 - 293933 | 47563.4 |
| ktr system potassium uptake protein a | Rxycam_00309 | P39760 | Negative | 293947 - 294618 | 24005.0 |
| ktr system potassium uptake protein b | Rxycam_00310 | O32081 | Negative | 294615 - 295943 | 46281.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
