Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 60 |
| Temperature range | thermophilic |
| Habitat | Arima Onsen; hot spring; nonvolcanic Arima Onsen (hot spring) |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles - Pairs |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rxycam_03082 | Not Available | Positive | 3017504 - 3017950 | 15389.9 |
| ecf rna polymerase sigma factor sigj | Rxycam_03083 | L0TCG5 | Positive | 3017947 - 3018822 | 32868.3 |
| hypothetical protein | Rxycam_03084 | Not Available | Positive | 3018819 - 3019208 | 14593.8 |
| hypothetical protein | Rxycam_03085 | Not Available | Positive | 3019221 - 3019436 | 7879.93 |
| hypothetical protein | Rxycam_03086 | P76222 | Positive | 3019437 - 3019778 | 12795.3 |
| hypothetical protein | Rxycam_03087 | Not Available | Negative | 3019945 - 3020466 | 19899.4 |
| multidrug efflux system atp-binding protein | Rxycam_03088 | O86311 | Positive | 3020732 - 3021643 | 32982.9 |
| multidrug efflux system permease protein | Rxycam_03089 | O05318 | Positive | 3021640 - 3023229 | 54450.4 |
| hypothetical protein | Rxycam_03090 | Not Available | Positive | 3023269 - 3023754 | 17669.6 |
| hypothetical protein | Rxycam_03091 | Not Available | Positive | 3024046 - 3024498 | 15954.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
