Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 60 |
| Temperature range | thermophilic |
| Habitat | Arima Onsen; hot spring; nonvolcanic Arima Onsen (hot spring) |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles - Pairs |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylamine--glycine ligase | Rxycam_03052 | Q8G2B1 | Positive | 2986794 - 2988071 | 45881.6 |
| adenylosuccinate lyase | Rxycam_03053 | P74384 | Positive | 2988094 - 2989401 | 48568.4 |
| phosphoribosylaminoimidazole-succinocarboxamide synthase | Rxycam_03054 | A7GHA0 | Positive | 2989407 - 2990120 | 26800.1 |
| phosphoribosylformylglycinamidine synthase subunit purs | Rxycam_03055 | Q55842 | Positive | 2990117 - 2990341 | 8162.95 |
| phosphoribosylformylglycinamidine synthase subunit purq | Rxycam_03056 | Q1AXB7 | Positive | 2990338 - 2991000 | 23841.6 |
| phosphoribosylformylglycinamidine synthase subunit purl | Rxycam_03057 | Q2RGU5 | Positive | 2990997 - 2993183 | 77081.2 |
| amidophosphoribosyltransferase | Rxycam_03058 | Q55038 | Positive | 2993183 - 2994613 | 51547.5 |
| phosphoribosylformylglycinamidine cyclo-ligase | Rxycam_03059 | Q7NMP5 | Positive | 2994617 - 2995642 | 35150.0 |
| phosphoribosylglycinamide formyltransferase | Rxycam_03060 | P08179 | Positive | 2995629 - 2996216 | 21374.7 |
| bifunctional purine biosynthesis protein purh | Rxycam_03061 | Q2RGU9 | Positive | 2996213 - 2997736 | 53991.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
