Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 60 |
| Temperature range | thermophilic |
| Habitat | Arima Onsen; hot spring; nonvolcanic Arima Onsen (hot spring) |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles - Pairs |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ion-translocating oxidoreductase complex subunit b | Rxycam_03022 | Q58280 | Positive | 2961145 - 2962347 | 43730.0 |
| hypothetical protein | Rxycam_03023 | Not Available | Positive | 2962348 - 2962683 | 12773.4 |
| sulfate adenylyltransferase | Rxycam_03024 | Q1AXE5 | Positive | 2962680 - 2963861 | 44444.7 |
| putative adenylyl-sulfate kinase | Rxycam_03025 | B7K5B1 | Positive | 2963955 - 2964521 | 21205.3 |
| hypothetical protein | Rxycam_03026 | O34578 | Positive | 2964518 - 2965327 | 28470.8 |
| lactoylglutathione lyase | Rxycam_03027 | Q55595 | Positive | 2965427 - 2965846 | 15695.6 |
| hypothetical protein | Rxycam_03028 | Not Available | Negative | 2965854 - 2966552 | 25786.4 |
| endolytic peptidoglycan transglycosylase rlpa | Rxycam_03029 | Q55752 | Positive | 2966839 - 2967408 | 19491.7 |
| alkanal monooxygenase alpha chain | Rxycam_03030 | A6WD69 | Positive | 2967504 - 2968532 | 38737.1 |
| bifunctional f420 biosynthesis protein fbib | Rxycam_03031 | Q73UJ3 | Positive | 2968529 - 2969593 | 40208.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
