Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 60 |
| Temperature range | thermophilic |
| Habitat | Arima Onsen; hot spring; nonvolcanic Arima Onsen (hot spring) |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles - Pairs |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rxycam_00291 | O96876 | Negative | 276517 - 276987 | 16058.1 |
| high molecular weight rubredoxin | Rxycam_00292 | Q9FDN6 | Negative | 276989 - 277483 | 18211.4 |
| hypothetical protein | Rxycam_00293 | Q5KXR9 | Positive | 277541 - 278581 | 38064.7 |
| molybdenum cofactor guanylyltransferase | Rxycam_00294 | A5D369 | Positive | 278563 - 279144 | 20147.6 |
| hypothetical protein | Rxycam_00295 | P0AB02 | Positive | 279141 - 279728 | 21312.0 |
| hypothetical protein | Rxycam_00296 | O29973 | Positive | 279683 - 280555 | 30086.5 |
| hypothetical protein | Rxycam_00297 | Not Available | Positive | 280584 - 281249 | 22955.3 |
| hypothetical protein | Rxycam_00298 | Q1AWK3 | Negative | 281246 - 281971 | 26143.3 |
| trehalase | Rxycam_00299 | Q10211 | Positive | 282115 - 283914 | 67268.1 |
| deaminated glutathione amidase | Rxycam_00300 | Q32LH4 | Positive | 283981 - 284811 | 30273.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
