Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 60 |
| Temperature range | thermophilic |
| Habitat | Arima Onsen; hot spring; nonvolcanic Arima Onsen (hot spring) |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles - Pairs |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rxycam_02982 | Not Available | Negative | 2922998 - 2923477 | 17434.8 |
| hypothetical protein | Rxycam_02983 | Not Available | Negative | 2923480 - 2923743 | 9625.54 |
| hth-type transcriptional regulator lutr | Rxycam_02984 | O07007 | Negative | 2923830 - 2924558 | 27345.6 |
| hypothetical protein | Rxycam_02985 | Not Available | Negative | 2924628 - 2924810 | 6908.42 |
| hypothetical protein | Rxycam_02986 | Not Available | Positive | 2924987 - 2925268 | 10401.1 |
| hypothetical protein | Rxycam_02987 | Not Available | Negative | 2925241 - 2925954 | 25816.8 |
| hypothetical protein | Rxycam_02988 | Q8BMD6 | Positive | 2926035 - 2927633 | 58578.0 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase | Rxycam_02989 | P42319 | Positive | 2927648 - 2928757 | 42007.9 |
| hypothetical protein | Rxycam_02990 | O31398 | Negative | 2928754 - 2929812 | 36455.9 |
| hypothetical protein | Rxycam_02991 | Q8BMD6 | Positive | 2929949 - 2931544 | 58895.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
