Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 60 |
| Temperature range | thermophilic |
| Habitat | Arima Onsen; hot spring; nonvolcanic Arima Onsen (hot spring) |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles - Pairs |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-allo-threonine aldolase | Rxycam_02832 | O07051 | Positive | 2775343 - 2776362 | 36711.5 |
| hypothetical protein | Rxycam_02833 | Not Available | Positive | 2776359 - 2776829 | 16829.3 |
| hypothetical protein | Rxycam_02834 | O07614 | Negative | 2776768 - 2777277 | 18905.3 |
| glutamine--fructose-6-phosphate aminotransferase | Rxycam_02835 | Q56213 | Positive | 2777748 - 2779586 | 65466.6 |
| diacylglycerol kinase | Rxycam_02836 | Q2YU29 | Negative | 2779587 - 2780468 | 31853.1 |
| holo-[acyl-carrier-protein] synthase | Rxycam_02837 | C5BZZ8 | Positive | 2780515 - 2780934 | 15630.1 |
| bifunctional nad(p)h-hydrate repair enzyme nnr | Rxycam_02838 | A1S0R2 | Positive | 2780956 - 2782512 | 52625.2 |
| inosine-5'-monophosphate dehydrogenase | Rxycam_02839 | Q58821 | Positive | 2782528 - 2783010 | 17910.8 |
| alanine racemase | Rxycam_02840 | Q67K79 | Positive | 2783020 - 2784111 | 38201.7 |
| hypothetical protein | Rxycam_02841 | Not Available | Positive | 2784095 - 2784427 | 12798.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
