Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 60 |
| Temperature range | thermophilic |
| Habitat | Arima Onsen; hot spring; nonvolcanic Arima Onsen (hot spring) |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles - Pairs |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme oxygenase (staphylobilin-producing) | Rxycam_00271 | Q4L849 | Positive | 254968 - 255282 | 11541.8 |
| hypothetical protein | Rxycam_00272 | Not Available | Negative | 255287 - 255433 | 5244.48 |
| global nitrogen regulator | Rxycam_00273 | P29283 | Positive | 255571 - 256269 | 26136.8 |
| arylsulfatase | Rxycam_00274 | Q8XNV1 | Negative | 256266 - 257606 | 51091.4 |
| udp-glucose 4-epimerase | Rxycam_00275 | A0R5C5 | Positive | 257897 - 258883 | 34511.2 |
| hypothetical protein | Rxycam_00276 | P9WKX8 | Negative | 258880 - 260163 | 43807.4 |
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | Rxycam_00277 | Q58619 | Negative | 260168 - 261220 | 38743.2 |
| hypothetical protein | Rxycam_00278 | Not Available | Positive | 261421 - 263442 | 70738.8 |
| hypothetical protein | Rxycam_00279 | O48917 | Negative | 263500 - 264693 | 45279.7 |
| hypothetical protein | Rxycam_00280 | Q8BMD6 | Positive | 264915 - 266480 | 57160.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
