Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 60 |
| Temperature range | thermophilic |
| Habitat | Arima Onsen; hot spring; nonvolcanic Arima Onsen (hot spring) |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles - Pairs |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rxycam_02732 | O59179 | Positive | 2675816 - 2676286 | 16303.8 |
| hypothetical protein | Rxycam_02733 | P9WPR8 | Positive | 2676283 - 2677221 | 34437.9 |
| response regulator protein vrar | Rxycam_02734 | P9WGM4 | Negative | 2677218 - 2677877 | 24005.0 |
| hypothetical protein | Rxycam_02735 | O34757 | Negative | 2677881 - 2678915 | 38038.1 |
| hypothetical protein | Rxycam_02736 | P31434 | Negative | 2679021 - 2681384 | 88168.2 |
| oxidoreductase ucpa | Rxycam_02737 | A0QYC2 | Negative | 2681394 - 2682107 | 25097.1 |
| hypothetical protein | Rxycam_02738 | O32050 | Negative | 2682203 - 2682679 | 17721.7 |
| hypothetical protein | Rxycam_02739 | Not Available | Negative | 2682702 - 2683205 | 18002.8 |
| hypothetical protein | Rxycam_02740 | Not Available | Negative | 2683468 - 2683569 | 3593.08 |
| hypothetical protein | Rxycam_02741 | P37692 | Negative | 2683613 - 2684641 | 36148.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
