Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 60 |
| Temperature range | thermophilic |
| Habitat | Arima Onsen; hot spring; nonvolcanic Arima Onsen (hot spring) |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles - Pairs |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rxycam_02702 | Not Available | Negative | 2648643 - 2649398 | 25946.0 |
| hypothetical protein | Rxycam_02703 | Q06823 | Positive | 2649557 - 2650036 | 17444.9 |
| rna polymerase sigma factor siga | Rxycam_02704 | P52328 | Positive | 2650203 - 2650970 | 28618.9 |
| hypothetical protein | Rxycam_02705 | Not Available | Negative | 2650975 - 2651346 | 13539.0 |
| hypothetical protein | Rxycam_02706 | Not Available | Negative | 2651403 - 2651678 | 9846.8 |
| hypothetical protein | Rxycam_02707 | Q4UKR8 | Positive | 2651877 - 2652335 | 17329.4 |
| atp-dependent clp protease atp-binding subunit clpc | Rxycam_02708 | Q8EU05 | Positive | 2652431 - 2655088 | 98393.8 |
| hypothetical protein | Rxycam_02709 | Not Available | Positive | 2655096 - 2655278 | 6970.4 |
| hypothetical protein | Rxycam_02710 | Q57601 | Positive | 2655293 - 2656138 | 31033.6 |
| cardiolipin synthase a | Rxycam_02711 | Q1I2L0 | Positive | 2656165 - 2657559 | 51288.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
