Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 60 |
| Temperature range | thermophilic |
| Habitat | Arima Onsen; hot spring; nonvolcanic Arima Onsen (hot spring) |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles - Pairs |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rxycam_00261 | Not Available | Negative | 244947 - 245126 | 7111.38 |
| transcriptional regulator perr | Rxycam_00262 | P54574 | Negative | 245119 - 245547 | 16212.3 |
| protease 4 | Rxycam_00263 | Q9C9C0 | Positive | 245620 - 247284 | 60552.1 |
| fosmidomycin resistance protein | Rxycam_00264 | O06481 | Positive | 247308 - 248483 | 39530.4 |
| hypothetical protein | Rxycam_00265 | O88022 | Positive | 248563 - 251007 | 88903.6 |
| ferric uptake regulation protein | Rxycam_00266 | P54574 | Positive | 251021 - 251479 | 17826.4 |
| hypothetical protein | Rxycam_00267 | P9WGC0 | Negative | 251489 - 252244 | 26912.8 |
| hypothetical protein | Rxycam_00268 | Not Available | Negative | 252241 - 252873 | 22358.6 |
| rna polymerase sigma factor siga | Rxycam_00269 | P52328 | Negative | 252960 - 253844 | 33876.3 |
| hypothetical protein | Rxycam_00270 | Not Available | Positive | 253986 - 254948 | 35137.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
