Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 60 |
| Temperature range | thermophilic |
| Habitat | Arima Onsen; hot spring; nonvolcanic Arima Onsen (hot spring) |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles - Pairs |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rxycam_02632 | Q9V0X6 | Negative | 2574098 - 2574520 | 15203.2 |
| acetyltransferase | Rxycam_02633 | Q7VG78 | Negative | 2574517 - 2575032 | 19512.6 |
| hypothetical protein | Rxycam_02634 | O69711 | Negative | 2575060 - 2575449 | 14257.3 |
| 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial | Rxycam_02635 | O86169 | Negative | 2575482 - 2576105 | 23282.2 |
| serine protease do-like htrb | Rxycam_02636 | F6AA62 | Negative | 2576118 - 2577200 | 37235.5 |
| hypothetical protein | Rxycam_02637 | Not Available | Positive | 2577316 - 2577633 | 10987.3 |
| hypothetical protein | Rxycam_02638 | Not Available | Negative | 2577630 - 2577908 | 10927.1 |
| light-independent protochlorophyllide reductase subunit b | Rxycam_02639 | B1LSG1 | Negative | 2577932 - 2579374 | 52262.1 |
| light-independent protochlorophyllide reductase subunit n | Rxycam_02640 | A5UUJ6 | Negative | 2579371 - 2580708 | 46794.5 |
| purine nucleoside phosphorylase deod-type | Rxycam_02641 | C3P552 | Negative | 2580764 - 2581474 | 25241.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
