Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 60 |
| Temperature range | thermophilic |
| Habitat | Arima Onsen; hot spring; nonvolcanic Arima Onsen (hot spring) |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles - Pairs |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rxycam_02612 | Not Available | Positive | 2556340 - 2556456 | 4240.13 |
| hypothetical protein | Rxycam_02613 | Not Available | Negative | 2556535 - 2556789 | 8520.22 |
| hypothetical protein | Rxycam_02614 | P14186 | Positive | 2557088 - 2557186 | 3803.77 |
| hypothetical protein | Rxycam_02615 | P37767 | Positive | 2557459 - 2558346 | 31916.5 |
| hypothetical protein | Rxycam_02616 | P30267 | Positive | 2558358 - 2559710 | 48090.0 |
| histidine ammonia-lyase | Rxycam_02617 | Q82I33 | Positive | 2559729 - 2561243 | 53527.6 |
| putative hydrolase | Rxycam_02618 | P37113 | Positive | 2561240 - 2562457 | 42786.0 |
| urocanate hydratase | Rxycam_02619 | Q1AYH3 | Positive | 2562454 - 2564115 | 60220.5 |
| putative aminohydrolase ssna | Rxycam_02620 | Q9HU77 | Positive | 2564112 - 2565371 | 45372.8 |
| imidazolonepropionase | Rxycam_02621 | Q1AYH1 | Positive | 2565368 - 2566615 | 43040.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
