Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 60 |
| Temperature range | thermophilic |
| Habitat | Arima Onsen; hot spring; nonvolcanic Arima Onsen (hot spring) |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles - Pairs |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-3-methyladenine glycosylase | Rxycam_00251 | Q92383 | Positive | 236867 - 237430 | 20351.7 |
| hypothetical protein | Rxycam_00252 | Q58481 | Positive | 237517 - 237921 | 14516.0 |
| hypothetical protein | Rxycam_00253 | Not Available | Negative | 237782 - 238621 | 30255.3 |
| amino-acid carrier protein alst | Rxycam_00254 | P44917 | Positive | 238660 - 239031 | 13459.5 |
| demethylphylloquinone reductase ndbb | Rxycam_00255 | Q55CD9 | Positive | 239135 - 240541 | 51732.4 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | Rxycam_00256 | P46322 | Positive | 240612 - 241178 | 20674.2 |
| hypothetical protein | Rxycam_00257 | Not Available | Positive | 241226 - 242077 | 30640.0 |
| general stress protein 18 | Rxycam_00258 | O28987 | Positive | 242135 - 242653 | 18541.4 |
| hypothetical protein | Rxycam_00259 | Not Available | Positive | 242697 - 243140 | 15220.0 |
| hypothetical protein | Rxycam_00260 | Not Available | Negative | 243137 - 244837 | 66586.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
