Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 60 |
| Temperature range | thermophilic |
| Habitat | Arima Onsen; hot spring; nonvolcanic Arima Onsen (hot spring) |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles - Pairs |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rxycam_02582 | Q9V0X3 | Negative | 2530138 - 2530482 | 12414.2 |
| putative fluoride ion transporter crcb | Rxycam_02583 | Q1AYN2 | Negative | 2530467 - 2530841 | 12624.5 |
| putative fluoride ion transporter crcb | Rxycam_02584 | Q1AYN1 | Negative | 2530841 - 2531536 | 24907.1 |
| hypothetical protein | Rxycam_02585 | Q1ATH8 | Positive | 2531795 - 2532190 | 15109.0 |
| hypothetical protein | Rxycam_02586 | P64588 | Negative | 2532200 - 2532727 | 20341.3 |
| putative d-amino-acid oxidase | Rxycam_02587 | P9WP26 | Positive | 2532825 - 2533832 | 36356.4 |
| hth-type transcriptional regulator lutr | Rxycam_02588 | O07007 | Positive | 2533915 - 2534664 | 27035.4 |
| hypothetical protein | Rxycam_02589 | O34409 | Positive | 2534693 - 2535646 | 34774.6 |
| hypothetical protein | Rxycam_02590 | Q83JB2 | Positive | 2535628 - 2536545 | 34313.6 |
| d-apiose dehydrogenase | Rxycam_02591 | B1G894 | Positive | 2536556 - 2537659 | 41321.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
