Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 60 |
| Temperature range | thermophilic |
| Habitat | Arima Onsen; hot spring; nonvolcanic Arima Onsen (hot spring) |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles - Pairs |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| high-affinity branched-chain amino acid transport system permease protein livh | Rxycam_02422 | P0AEX8 | Negative | 2374091 - 2375104 | 35332.6 |
| leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein | Rxycam_02423 | Q8FWP6 | Negative | 2375117 - 2376358 | 44222.4 |
| transcriptional regulator kdgr | Rxycam_02424 | A1B8Z4 | Positive | 2376573 - 2377376 | 27978.8 |
| succinyl-coa--l-malate coa-transferase beta subunit | Rxycam_02425 | A9WGE3 | Positive | 2377373 - 2378563 | 43576.0 |
| citrate lyase subunit beta | Rxycam_02426 | P17725 | Positive | 2378560 - 2379420 | 30419.2 |
| isatin hydrolase | Rxycam_02427 | A0NLY7 | Positive | 2379417 - 2380226 | 28355.1 |
| hypothetical protein | Rxycam_02428 | P54956 | Positive | 2380223 - 2381641 | 49705.2 |
| hypothetical protein | Rxycam_02429 | P9WKN4 | Positive | 2381645 - 2382601 | 35102.4 |
| dihydroanticapsin 7-dehydrogenase | Rxycam_02430 | Q9X248 | Negative | 2382667 - 2383437 | 26584.0 |
| hth-type transcriptional repressor kstr2 | Rxycam_02431 | P9WMB8 | Negative | 2383434 - 2384054 | 23010.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
