Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 60 |
| Temperature range | thermophilic |
| Habitat | Arima Onsen; hot spring; nonvolcanic Arima Onsen (hot spring) |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles - Pairs |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin-1 | Rxycam_00231 | P15788 | Positive | 216742 - 217011 | 9914.68 |
| ion-translocating oxidoreductase complex subunit c | Rxycam_00232 | A0A0H3AJC2 | Negative | 217060 - 218226 | 43143.3 |
| ferredoxin | Rxycam_00233 | Q45560 | Negative | 218254 - 218517 | 9452.24 |
| nad(p)h-quinone oxidoreductase subunit i, chloroplastic | Rxycam_00234 | Q3AC82 | Negative | 218609 - 219160 | 20670.3 |
| hypothetical protein | Rxycam_00235 | Not Available | Positive | 219417 - 219980 | 20678.7 |
| hypothetical protein | Rxycam_00236 | Not Available | Negative | 220683 - 221078 | 14069.8 |
| hypothetical protein | Rxycam_00237 | P9WMH2 | Positive | 221212 - 221832 | 21481.2 |
| hypothetical protein | Rxycam_00238 | Q1D375 | Negative | 221845 - 222234 | 13585.2 |
| hypothetical protein | Rxycam_00239 | Not Available | Positive | 222436 - 222906 | 16741.7 |
| putative nitrate transporter nart | Rxycam_00240 | P46907 | Positive | 223032 - 224213 | 40615.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
