Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 60 |
| Temperature range | thermophilic |
| Habitat | Arima Onsen; hot spring; nonvolcanic Arima Onsen (hot spring) |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles - Pairs |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rxycam_00221 | O06553 | Positive | 211713 - 212138 | 15964.3 |
| protein-l-isoaspartate o-methyltransferase | Rxycam_00222 | A3CXP8 | Positive | 212143 - 212787 | 23022.7 |
| hypothetical protein | Rxycam_00223 | Not Available | Negative | 212763 - 213242 | 18294.8 |
| hypothetical protein | Rxycam_00224 | Q57060 | Positive | 213365 - 214171 | 29650.2 |
| iron-sulfur cluster repair protein scda | Rxycam_00225 | Q4L8T8 | Positive | 214284 - 214991 | 26664.7 |
| hypothetical protein | Rxycam_00226 | Not Available | Positive | 214991 - 215419 | 15234.3 |
| hypothetical protein | Rxycam_00227 | Not Available | Positive | 215421 - 215714 | 9488.6 |
| fe-s protein maturation auxiliary factor suft | Rxycam_00228 | A0A0H2XI17 | Positive | 215711 - 216013 | 11305.6 |
| hypothetical protein | Rxycam_00229 | Not Available | Positive | 216156 - 216248 | 3332.41 |
| peroxiredoxin osmc | Rxycam_00230 | P0C0L2 | Positive | 216292 - 216729 | 14818.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
