Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 60 |
| Temperature range | thermophilic |
| Habitat | Arima Onsen; hot spring; nonvolcanic Arima Onsen (hot spring) |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles - Pairs |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rxycam_02221 | Not Available | Positive | 2151307 - 2151720 | 15224.5 |
| hypothetical protein | Rxycam_02222 | Not Available | Positive | 2151828 - 2152208 | 13863.3 |
| zinc-dependent sulfurtransferase sufu | Rxycam_02223 | O32163 | Negative | 2152217 - 2152639 | 15985.0 |
| cysteine desulfurase sufs | Rxycam_02224 | Q9K7A0 | Negative | 2152636 - 2153862 | 45240.1 |
| biphenyl 2,3-dioxygenase, ferredoxin component | Rxycam_02225 | Q07947 | Negative | 2153870 - 2154229 | 13336.1 |
| hypothetical protein | Rxycam_02226 | Q8CTA3 | Negative | 2154239 - 2155600 | 50419.6 |
| putative universal stress protein | Rxycam_02227 | P42297 | Negative | 2155597 - 2156052 | 15923.0 |
| hypothetical protein | Rxycam_02228 | O32162 | Negative | 2156158 - 2157570 | 52957.6 |
| vegetative protein 296 | Rxycam_02229 | P80866 | Negative | 2157582 - 2158334 | 27826.6 |
| 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial | Rxycam_02230 | Q9KJ20 | Negative | 2158604 - 2159410 | 29200.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
