Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 60 |
| Temperature range | thermophilic |
| Habitat | Arima Onsen; hot spring; nonvolcanic Arima Onsen (hot spring) |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles - Pairs |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fosfomycin resistance protein abaf | Rxycam_02121 | P76350 | Positive | 2058055 - 2059410 | 48369.7 |
| glucose 1-dehydrogenase 2 | Rxycam_02122 | Q9WYG0 | Positive | 2059407 - 2060174 | 26613.2 |
| 2-dehydro-3-deoxygluconokinase | Rxycam_02123 | Q53W83 | Positive | 2060247 - 2061203 | 33468.1 |
| khg/kdpg aldolase | Rxycam_02124 | P50846 | Positive | 2061219 - 2061872 | 22525.0 |
| putative oxidoreductase uxub | Rxycam_02125 | O34896 | Positive | 2061872 - 2062717 | 29055.0 |
| hth-type transcriptional repressor purr | Rxycam_02126 | O87590 | Positive | 2062740 - 2064404 | 60809.5 |
| hypothetical protein | Rxycam_02127 | Not Available | Negative | 2064410 - 2064913 | 17599.0 |
| cytochrome b6-f complex iron-sulfur subunit | Rxycam_02128 | I3R9N2 | Positive | 2065054 - 2065503 | 14921.7 |
| hypothetical protein | Rxycam_02129 | Not Available | Negative | 2065515 - 2065682 | 6535.74 |
| hypothetical protein | Rxycam_02130 | O34611 | Negative | 2065710 - 2067149 | 52549.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
