Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 60 |
| Temperature range | thermophilic |
| Habitat | Arima Onsen; hot spring; nonvolcanic Arima Onsen (hot spring) |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles - Pairs |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rxycam_01931 | P81717 | Positive | 1866132 - 1867619 | 55381.8 |
| udp-glucose 4-epimerase | Rxycam_01932 | Q57664 | Negative | 1867624 - 1868544 | 33412.3 |
| udp-glucose 4-epimerase | Rxycam_01933 | Q6GMI9 | Negative | 1868541 - 1869509 | 36260.2 |
| udp-glucose 6-dehydrogenase tuad | Rxycam_01934 | O32271 | Negative | 1869502 - 1870881 | 49586.4 |
| teichoic acid translocation permease protein tagg | Rxycam_01935 | Q50862 | Positive | 1871101 - 1871916 | 30257.6 |
| vitamin b12 import atp-binding protein btud | Rxycam_01936 | Q07698 | Positive | 1871913 - 1873214 | 48394.2 |
| hypothetical protein | Rxycam_01937 | P9WMY2 | Positive | 1873221 - 1874222 | 36039.1 |
| n-acetylglucosaminyl-diphospho-decaprenol l-rhamnosyltransferase | Rxycam_01938 | P9WMY2 | Positive | 1874232 - 1875080 | 30934.3 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | Rxycam_01939 | Q9HU21 | Negative | 1875077 - 1875628 | 20752.8 |
| glucose-1-phosphate thymidylyltransferase 1 | Rxycam_01940 | P55254 | Negative | 1875625 - 1876506 | 33024.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
