Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 60 |
| Temperature range | thermophilic |
| Habitat | Arima Onsen; hot spring; nonvolcanic Arima Onsen (hot spring) |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles - Pairs |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rxycam_01830 | Not Available | Positive | 1769347 - 1769925 | 21177.7 |
| hypothetical protein | Rxycam_01831 | Not Available | Positive | 1769922 - 1770485 | 19997.6 |
| hypothetical protein | Rxycam_01832 | Not Available | Positive | 1770509 - 1770706 | 6942.65 |
| hypothetical protein | Rxycam_01833 | Not Available | Positive | 1770732 - 1771223 | 16412.6 |
| hypothetical protein | Rxycam_01834 | O34866 | Positive | 1771269 - 1772102 | 30135.7 |
| hypothetical protein | Rxycam_01835 | B2HDP8 | Positive | 1772089 - 1772886 | 29461.2 |
| validamine 7-phosphate valienyltransferase | Rxycam_01836 | Q00075 | Negative | 1772883 - 1774334 | 53857.9 |
| trehalose synthase | Rxycam_01837 | Q1ARU5 | Negative | 1774367 - 1775617 | 46692.9 |
| serine-protein kinase rsbw | Rxycam_01838 | Q8CXL7 | Negative | 1775727 - 1776179 | 16300.4 |
| hypothetical protein | Rxycam_01839 | O28852 | Negative | 1776289 - 1777122 | 30972.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
