Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 60 |
| Temperature range | thermophilic |
| Habitat | Arima Onsen; hot spring; nonvolcanic Arima Onsen (hot spring) |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles - Pairs |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphomannomutase/phosphoglucomutase | Rxycam_00171 | P0C7J2 | Negative | 165151 - 166509 | 49624.0 |
| hypothetical protein | Rxycam_00172 | P50730 | Positive | 166611 - 167150 | 19293.1 |
| hypothetical protein | Rxycam_00173 | Not Available | Positive | 167156 - 167683 | 18298.9 |
| hypothetical protein | Rxycam_00174 | Q8E5N2 | Positive | 167729 - 168385 | 24094.2 |
| peptidoglycan d,d-transpeptidase mrda | Rxycam_00175 | P44469 | Positive | 168390 - 170453 | 74766.3 |
| phosphatidylglycerol--prolipoprotein diacylglyceryl transferase | Rxycam_00176 | Q0RFY2 | Positive | 170463 - 171308 | 31258.9 |
| peroxide-responsive repressor perr | Rxycam_00177 | Q49YQ6 | Positive | 171388 - 171771 | 14079.9 |
| manganese-binding lipoprotein mnta | Rxycam_00178 | Q9KFG3 | Positive | 171762 - 172742 | 36123.5 |
| manganese transport system atp-binding protein mntb | Rxycam_00179 | O34338 | Positive | 172742 - 173524 | 28670.9 |
| manganese transport system membrane protein mntb | Rxycam_00180 | Q92AG0 | Positive | 173517 - 174368 | 29537.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
