Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 60 |
| Temperature range | thermophilic |
| Habitat | Arima Onsen; hot spring; nonvolcanic Arima Onsen (hot spring) |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles - Pairs |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine synthetase | Rxycam_00161 | Q9RDS6 | Negative | 156514 - 157845 | 50677.0 |
| hypothetical protein | Rxycam_00162 | Not Available | Positive | 158079 - 158864 | 27736.3 |
| hypothetical protein | Rxycam_00163 | Not Available | Positive | 158883 - 159014 | 5150.67 |
| putative glutamate--cysteine ligase 2 | Rxycam_00164 | Q1AWY5 | Negative | 159007 - 160146 | 42823.6 |
| alkyl hydroperoxide reductase e | Rxycam_00165 | P65689 | Positive | 160242 - 160700 | 17422.5 |
| hypothetical protein | Rxycam_00166 | Not Available | Positive | 160697 - 161791 | 40239.3 |
| 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme- a synthase | Rxycam_00167 | Not Available | Positive | 161818 - 162726 | 31842.0 |
| hypothetical protein | Rxycam_00168 | Q9HQM3 | Positive | 162794 - 163555 | 27964.7 |
| hypothetical protein | Rxycam_00169 | Not Available | Positive | 163545 - 164342 | 30173.9 |
| hypothetical protein | Rxycam_00170 | Not Available | Positive | 164466 - 165086 | 21800.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
