Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 60 |
| Temperature range | thermophilic |
| Habitat | Arima Onsen; hot spring; nonvolcanic Arima Onsen (hot spring) |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles - Pairs |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxybenzoate transporter pcak | Rxycam_01590 | P76230 | Positive | 1541577 - 1543052 | 52704.7 |
| hypothetical protein | Rxycam_01591 | Not Available | Positive | 1543067 - 1543429 | 12469.0 |
| hypothetical protein | Rxycam_01592 | Not Available | Positive | 1543573 - 1543950 | 13926.3 |
| putative thiamine pyrophosphate-containing protein ydap | Rxycam_01593 | P96591 | Positive | 1543989 - 1545773 | 65187.3 |
| l-rhamnonate dehydratase | Rxycam_01594 | H2IFX0 | Positive | 1545770 - 1546858 | 39359.9 |
| hypothetical protein | Rxycam_01595 | A0A0H3KZS3 | Positive | 1546880 - 1549945 | 114342.0 |
| hypothetical protein | Rxycam_01596 | Not Available | Positive | 1549942 - 1550382 | 15876.8 |
| hypothetical protein | Rxycam_01597 | P0AC99 | Positive | 1550501 - 1551178 | 23347.5 |
| formate dehydrogenase subunit alpha | Rxycam_01598 | Q934F5 | Positive | 1551312 - 1551881 | 21370.4 |
| formate dehydrogenase 2 subunit alpha (cytochrome c-553) | Rxycam_01599 | Q727P3 | Positive | 1551978 - 1554521 | 94903.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
