Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 60 |
| Temperature range | thermophilic |
| Habitat | Arima Onsen; hot spring; nonvolcanic Arima Onsen (hot spring) |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles - Pairs |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rxycam_00151 | Not Available | Positive | 148284 - 148619 | 12395.9 |
| putative aminoacrylate hydrolase rutd | Rxycam_00152 | P9WNH2 | Positive | 148841 - 150049 | 43988.5 |
| hypothetical protein | Rxycam_00153 | Not Available | Negative | 150057 - 150686 | 23740.9 |
| inner membrane transport permease yadh | Rxycam_00154 | P06755 | Negative | 150728 - 151501 | 28535.4 |
| linearmycin resistance atp-binding protein lnrl | Rxycam_00155 | Q8XXY9 | Negative | 151494 - 152447 | 35294.5 |
| hypothetical protein | Rxycam_00156 | Q8E5N2 | Positive | 152646 - 153389 | 27385.5 |
| hypothetical protein | Rxycam_00157 | Not Available | Negative | 153480 - 153740 | 10257.9 |
| molybdenum cofactor biosynthesis protein b | Rxycam_00158 | Q81KI3 | Negative | 153747 - 154271 | 18868.5 |
| hydroxyacylglutathione hydrolase gloc | Rxycam_00159 | P75849 | Negative | 154268 - 154912 | 22843.5 |
| cytosol aminopeptidase | Rxycam_00160 | A7NG41 | Negative | 154909 - 156369 | 50606.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
