Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 60 |
| Temperature range | thermophilic |
| Habitat | Arima Onsen; hot spring; nonvolcanic Arima Onsen (hot spring) |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles - Pairs |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rxycam_01580 | Not Available | Negative | 1534020 - 1534526 | 15690.0 |
| hypothetical protein | Rxycam_01581 | Not Available | Negative | 1534721 - 1535212 | 15658.5 |
| hypothetical protein | Rxycam_01582 | Not Available | Negative | 1535389 - 1535859 | 14722.5 |
| hypothetical protein | Rxycam_01583 | Not Available | Negative | 1536054 - 1536182 | 4678.04 |
| hypothetical protein | Rxycam_01584 | Not Available | Negative | 1536182 - 1537507 | 49153.9 |
| hypothetical protein | Rxycam_01585 | Q45659 | Negative | 1537521 - 1538003 | 17794.9 |
| menaquinol-cytochrome c reductase cytochrome b subunit | Rxycam_01586 | P46912 | Negative | 1538007 - 1538762 | 29007.4 |
| cytochrome b6-f complex iron-sulfur subunit | Rxycam_01587 | P26292 | Negative | 1538752 - 1539372 | 22613.2 |
| hypothetical protein | Rxycam_01588 | Not Available | Negative | 1539375 - 1540694 | 48200.5 |
| hypothetical protein | Rxycam_01589 | Not Available | Negative | 1540691 - 1541311 | 22135.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
