Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 60 |
| Temperature range | thermophilic |
| Habitat | Arima Onsen; hot spring; nonvolcanic Arima Onsen (hot spring) |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles - Pairs |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lexa repressor | Rxycam_01440 | A7GR32 | Negative | 1412057 - 1412695 | 23559.4 |
| hypothetical protein | Rxycam_01441 | Not Available | Positive | 1412860 - 1413531 | 24500.2 |
| hypothetical protein | Rxycam_01442 | Not Available | Positive | 1413528 - 1414127 | 21765.8 |
| hypothetical protein | Rxycam_01443 | Not Available | Negative | 1414837 - 1415559 | 26489.3 |
| hypothetical protein | Rxycam_01444 | Not Available | Negative | 1415552 - 1415923 | 13635.4 |
| gtp cyclohydrolase fole2 | Rxycam_01445 | B5YCT4 | Negative | 1416298 - 1417020 | 26155.6 |
| hypothetical protein | Rxycam_01446 | Q57607 | Negative | 1417171 - 1417464 | 11079.9 |
| hypothetical protein | Rxycam_01447 | P9WKT6 | Positive | 1418018 - 1418212 | 7585.11 |
| hypothetical protein | Rxycam_01448 | Not Available | Negative | 1418442 - 1418600 | 5640.52 |
| tn916 family transposase | Rxycam_01449 | Q8R890 | Positive | 1418859 - 1419989 | 41859.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
