Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 60 |
| Temperature range | thermophilic |
| Habitat | Arima Onsen; hot spring; nonvolcanic Arima Onsen (hot spring) |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles - Pairs |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rxycam_01430 | P17223 | Negative | 1399333 - 1400457 | 43782.5 |
| hypothetical protein | Rxycam_01431 | Q58926 | Negative | 1400461 - 1401750 | 48128.8 |
| type-1 restriction enzyme r protein | Rxycam_01432 | Q5HK76 | Negative | 1401743 - 1404721 | 114881.0 |
| hypothetical protein | Rxycam_01433 | P9WKT6 | Negative | 1405089 - 1405280 | 7381.87 |
| hypothetical protein | Rxycam_01434 | P43270 | Negative | 1405548 - 1406558 | 37315.2 |
| hypothetical protein | Rxycam_01435 | Not Available | Negative | 1406555 - 1407151 | 21996.7 |
| hypothetical protein | Rxycam_01436 | Not Available | Negative | 1407227 - 1407484 | 9555.48 |
| hypothetical protein | Rxycam_01437 | Not Available | Negative | 1407481 - 1407828 | 13525.1 |
| hypothetical protein | Rxycam_01438 | Not Available | Negative | 1407825 - 1410290 | 89574.5 |
| hypothetical protein | Rxycam_01439 | Not Available | Negative | 1410631 - 1412034 | 52523.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
