Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 60 |
| Temperature range | thermophilic |
| Habitat | Arima Onsen; hot spring; nonvolcanic Arima Onsen (hot spring) |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles - Pairs |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l3 | Rxycam_01130 | Q1AU29 | Negative | 1089063 - 1089647 | 20852.8 |
| 30s ribosomal protein s10 | Rxycam_01131 | Q1AU28 | Negative | 1089685 - 1089996 | 11738.2 |
| elongation factor tu | Rxycam_01132 | Q1AU14 | Negative | 1090004 - 1091206 | 44103.8 |
| elongation factor g | Rxycam_01133 | Q1AU26 | Negative | 1091225 - 1093372 | 79265.6 |
| 30s ribosomal protein s7 | Rxycam_01134 | Q1AU25 | Negative | 1093383 - 1093853 | 17720.6 |
| 30s ribosomal protein s12 | Rxycam_01135 | Q1AU24 | Negative | 1093868 - 1094236 | 13452.5 |
| dna-directed rna polymerase subunit beta' | Rxycam_01136 | Q1AU23 | Negative | 1094437 - 1098324 | 146115.0 |
| dna-directed rna polymerase subunit beta | Rxycam_01137 | Q1AU22 | Negative | 1098328 - 1101705 | 125069.0 |
| 50s ribosomal protein l7/l12 | Rxycam_01138 | Q1AU21 | Negative | 1101899 - 1102285 | 13224.8 |
| 50s ribosomal protein l10 | Rxycam_01139 | Q1AU20 | Negative | 1102316 - 1102840 | 18771.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
