Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 60 |
| Temperature range | thermophilic |
| Habitat | Arima Onsen; hot spring; nonvolcanic Arima Onsen (hot spring) |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles - Pairs |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l14 | Rxycam_01120 | Q1AU39 | Negative | 1084556 - 1084924 | 13091.9 |
| hypothetical protein | Rxycam_01121 | Q1AU38 | Negative | 1084924 - 1085340 | 15751.6 |
| 50s ribosomal protein l29 | Rxycam_01122 | Q1AU37 | Negative | 1085337 - 1085546 | 8402.16 |
| 50s ribosomal protein l16 | Rxycam_01123 | Q1AU36 | Negative | 1085546 - 1085962 | 15441.3 |
| 30s ribosomal protein s3 | Rxycam_01124 | Q1AU35 | Negative | 1085966 - 1086622 | 24309.2 |
| 50s ribosomal protein l22 | Rxycam_01125 | Q1AU34 | Negative | 1086625 - 1087008 | 13963.7 |
| 30s ribosomal protein s19 | Rxycam_01126 | Q1AU33 | Negative | 1087014 - 1087295 | 11095.5 |
| 50s ribosomal protein l2 | Rxycam_01127 | Q1AU32 | Negative | 1087296 - 1088135 | 30590.1 |
| 50s ribosomal protein l23 | Rxycam_01128 | Q1AU31 | Negative | 1088137 - 1088424 | 10975.2 |
| 50s ribosomal protein l4 | Rxycam_01129 | Q1AU30 | Negative | 1088426 - 1089061 | 23323.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
