Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 60 |
| Temperature range | thermophilic |
| Habitat | Arima Onsen; hot spring; nonvolcanic Arima Onsen (hot spring) |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles - Pairs |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rxycam_01060 | Not Available | Positive | 1037424 - 1037567 | 4785.16 |
| acetyl-coenzyme a carboxylase carboxyl transferase subunit alpha | Rxycam_01061 | Q1AU97 | Negative | 1037579 - 1038550 | 34995.7 |
| acetyl-coenzyme a carboxylase carboxyl transferase subunit beta | Rxycam_01062 | Q1AU96 | Negative | 1038547 - 1039407 | 31321.7 |
| tryptophan synthase alpha chain | Rxycam_01063 | B7JUK2 | Negative | 1039388 - 1040179 | 27251.5 |
| tryptophan synthase beta chain | Rxycam_01064 | O66923 | Negative | 1040169 - 1041377 | 43158.2 |
| n-(5'-phosphoribosyl)anthranilate isomerase | Rxycam_01065 | Q1AU93 | Negative | 1041361 - 1041981 | 21517.7 |
| hypothetical protein | Rxycam_01066 | Not Available | Positive | 1042213 - 1042440 | 8311.86 |
| oxygen sensor protein dosp | Rxycam_01067 | P76129 | Positive | 1042559 - 1043317 | 27823.4 |
| indole-3-glycerol phosphate synthase | Rxycam_01068 | A4SG41 | Negative | 1043314 - 1044084 | 27183.4 |
| anthranilate phosphoribosyltransferase | Rxycam_01069 | Q1AU89 | Negative | 1044081 - 1045109 | 35631.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
