Shouchella miscanthi AK13

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Bacillaceae

Genus

Shouchella

Description

Shouchella miscanthi AK13 is characterized by having a single replicon, indicating a streamlined genomic organization. This trait suggests a potential for efficient replication and maintenance of genetic material. The specific accession for this strain is CP042163.1, which allows for its identification and further study within microbial databases. The genomic simplicity associated with a single replicon can be advantageous in various environmental conditions, as it may facilitate quicker responses to changes in the surrounding environment. Understanding the genetic framework of Shouchella miscanthi AK13 could provide insights into its adaptability and ecological role, particularly in relation to its interactions with its host and surrounding microbiota. Overall, the identification of Shouchella miscanthi AK13 and its genomic characteristics highlights the importance of studying microbial organisms, as they can offer valuable information regarding microbial ecology and potential applications in biotechnology or agriculture.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyBacillaceae
GenusShouchella
SpeciesShouchella miscanthi
StrainAK13

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Shouchella miscanthi AK13
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shouchella miscanthi AK13, Chromosome

Gene Summary

Adenine Count

1273076 bp

Thymine Count

1275490 bp

Guanine Count

850229 bp

Cytosine Count

851813 bp

Genome Length

4250708 bp

Protein-coding Genes

4125 genes

Non-Coding Genes

255 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttlNot AvailableNot AvailablePositive1260051 - 1260064Not Available
Site-specific integrase-Q8R890Negative1270773 - 127190343814.3
Conjugal transfer protein-Q3J4E6Negative1271978 - 127231613123.8
Helix-turn-helix domain transcriptional regulator-Not AvailablePositive1272591 - 12727917952.66
hypothetical protein-Not AvailablePositive1272795 - 12729957705.29
Recombination protein-Q9RX92Positive1273012 - 127368925878.6
Hypothetical protein-Not AvailablePositive1273772 - 127432621350.6
hypothetical-Not AvailablePositive1274323 - 12744273612.62
Hypothetical protein-Not AvailablePositive1274524 - 127488614312.8
hypothetical-Not AvailablePositive1274916 - 12750354538.36

Displaying genes 1 – 10 of 4380 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.