Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas mediterranea |
| Strain | 9.1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1229552 bp
Thymine Count
1232435 bp
Guanine Count
1942212 bp
Cytosine Count
1941936 bp
Genome Length
6346235 bp
Protein-coding Genes
5363 genes
Non-Coding Genes
241 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, xre family with cupin sensor | SAMN05216476_0792 | P0A9U6 | Positive | 876645 - 877193 | 19970.0 |
| cytochrome c5 | SAMN05216476_0793 | P00121 | Positive | 877363 - 877788 | 14366.6 |
| acyl-coa hydrolase | SAMN05216476_0794 | P38942 | Positive | 877924 - 879846 | 70985.9 |
| xanthine phosphoribosyltransferase | SAMN05216476_0795 | C3K452 | Negative | 879970 - 880542 | 20351.8 |
| atp-dependent dna helicase rep | SAMN05216476_0796 | Q9L6S1 | Negative | 880600 - 882609 | 76464.6 |
| diguanylate cyclase/phosphodiesterase | SAMN05216476_0797 | Q9HYT3 | Positive | 882862 - 884526 | 61757.6 |
| multidrug resistance protein, mate family | SAMN05216476_0798 | Q88BA2 | Negative | 884652 - 886046 | 49810.6 |
| transcriptional regulator, lysr family | SAMN05216476_0799 | P0A9F8 | Positive | 886207 - 887127 | 34414.4 |
| methyl-accepting chemotaxis protein | SAMN05216476_0800 | Q88NI1 | Positive | 887316 - 889292 | 70153.0 |
| protein of unknown function | SAMN05216476_0801 | Not Available | Positive | 889731 - 890945 | 44306.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tomato pith necrosis | Causes | PMC12847849 |
| Pith necrosis | Causes | PMC12847849 |






