Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas mediterranea |
| Strain | 9.1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1229552 bp
Thymine Count
1232435 bp
Guanine Count
1942212 bp
Cytosine Count
1941936 bp
Genome Length
6346235 bp
Protein-coding Genes
5363 genes
Non-Coding Genes
241 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Attl | Not Available | Not Available | Positive | 3922806 - 3922818 | Not Available |
| Lysozyme | SAMN05216476_3642 | Not Available | Negative | 3937222 - 3937731 | 18077.4 |
| Putative endolysin | SAMN05216476_3643 | Q9KCE0 | Negative | 3937728 - 3938150 | 15518.4 |
| Hypothetical protein | SAMN05216476_3644 | Not Available | Negative | 3938217 - 3938894 | 24885.5 |
| Tail fiber protein | SAMN05216476_3645 | P03749 | Negative | 3939211 - 3942303 | 112120.0 |
| Tail assembly protein i | SAMN05216476_3646 | O64334 | Negative | 3942364 - 3942969 | 21362.1 |
| Putative lipoprotein | SAMN05216476_3647 | Not Available | Negative | 3943011 - 3943433 | 14329.3 |
| Hypothetical protein | SAMN05216476_3648 | P19653 | Negative | 3943532 - 3944338 | 29387.6 |
| Hypothetical protein | SAMN05216476_3649 | P44189 | Negative | 3944335 - 3945393 | 38819.1 |
| hypothetical protein | SAMN05216476_3650 | Not Available | Negative | 3945357 - 3945527 | 6396.76 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tomato pith necrosis | Causes | PMC12847849 |
| Pith necrosis | Causes | PMC12847849 |






