Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas mediterranea |
| Strain | 9.1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1229552 bp
Thymine Count
1232435 bp
Guanine Count
1942212 bp
Cytosine Count
1941936 bp
Genome Length
6346235 bp
Protein-coding Genes
5363 genes
Non-Coding Genes
241 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine/threonine protein phosphatase stp1 | SAMN05216476_0736 | P9WHW4 | Positive | 819891 - 820568 | 24212.9 |
| serine/threonine-protein kinase ppka | SAMN05216476_0737 | P54744 | Positive | 820565 - 823684 | 111867.0 |
| putative abc transport system atp-binding protein | SAMN05216476_0738 | Q89KN0 | Positive | 823681 - 824400 | 25515.0 |
| putative abc transport system permease protein | SAMN05216476_0739 | Not Available | Positive | 824400 - 825596 | 42334.4 |
| sulfatase-modifying factor enzyme 1 | SAMN05216476_0740 | Q58CP2 | Positive | 825589 - 827334 | 63240.1 |
| ymgg-like gly-zipper | SAMN05216476_0741 | Not Available | Positive | 827419 - 828354 | 32757.8 |
| hypothetical protein | SAMN05216476_0744 | Not Available | Negative | 829628 - 829993 | 13144.4 |
| hypothetical protein | SAMN05216476_0746 | Not Available | Positive | 830461 - 830844 | 14309.7 |
| delta-60 repeat domain-containing protein | SAMN05216476_0747 | Not Available | Positive | 830967 - 832301 | 46764.4 |
| delta-60 repeat domain-containing protein | SAMN05216476_0748 | Not Available | Positive | 832429 - 833793 | 49049.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tomato pith necrosis | Causes | PMC12847849 |
| Pith necrosis | Causes | PMC12847849 |






