Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas mediterranea |
| Strain | 9.1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1229552 bp
Thymine Count
1232435 bp
Guanine Count
1942212 bp
Cytosine Count
1941936 bp
Genome Length
6346235 bp
Protein-coding Genes
5363 genes
Non-Coding Genes
241 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216476_0391 | Not Available | Positive | 450314 - 450946 | 24681.4 |
| hypothetical protein | SAMN05216476_0392 | Not Available | Negative | 451209 - 451826 | 22339.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05216476_0393 | Q3IYV6 | Negative | 451823 - 452395 | 21903.7 |
| ca-activated chloride channel family protein | SAMN05216476_0394 | P76481 | Negative | 452631 - 454310 | 60444.5 |
| nadph:quinone reductase | SAMN05216476_0395 | K4BW79 | Negative | 454492 - 455493 | 34401.3 |
| dna-binding transcriptional regulator, lysr family | SAMN05216476_0396 | P30864 | Positive | 455601 - 456479 | 32288.7 |
| predicted arabinose efflux permease, mfs family | SAMN05216476_0397 | P37643 | Negative | 456511 - 457824 | 47045.0 |
| hypothetical protein | SAMN05216476_0398 | O67293 | Negative | 457907 - 458467 | 19757.6 |
| rieske | SAMN05216476_0399 | Q96NN9 | Positive | 458606 - 460141 | 55906.5 |
| biofilm pga synthesis protein pgad | SAMN05216476_0400 | P69433 | Negative | 460254 - 460757 | 18882.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tomato pith necrosis | Causes | PMC12847849 |
| Pith necrosis | Causes | PMC12847849 |






